Fluviicola taffensis DSM 16823

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Crocinitomicaceae

Genus

Fluviicola

Description

Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) is a strictly aerobic, yellow-orange-pigmented, motile, Gram-negative bacterium isolated from water of the River Taff, Cardiff, UK, during January 2000. The cells are non-flagellated, rod-shaped. They are 0.4-0.5 mm wide and 1.5-5.7 mm long, with rarer longer filaments of up to 51 mm in length. Colonies are 1-5 mm in diameter, circular, flat, transparent, shiny, yellow-orange and creamy on high nutrient solid media. It is motile by gliding. Growth occurs between 4-25 degrees Celsius, with an optimum at about 20 degrees Celsius. It is able to hydrolyze DNA and gelatin, but not agar, arginine, aesculin or starch. Acid is not produced from glucose. F.taffensis is resistant to chloramphenicol, streptomycin and kanamycin, but susceptible to penicillin G, ampicillin, rifampicin and tetracycline. (Adapted from PMID: 16166730). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyCrocinitomicaceae
GenusFluviicola
SpeciesFluviicola taffensis
StrainDSM 16823

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Fluviicola taffensis DSM 16823
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature20
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityNo

Genome Summary

Fluviicola taffensis DSM 16823, complete sequence.

Gene Summary

Adenine Count

1474758 bp

Thymine Count

1467810 bp

Guanine Count

846439 bp

Cytosine Count

844570 bp

Genome Length

4633577 bp

Protein-coding Genes

4018 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crispr-associated endonuclease cas2FLUTA_RS15705Not AvailableNegative3607323 - 360766113246.2
type ii crispr-associated endonuclease cas1FLUTA_RS15710Not AvailableNegative3607678 - 360856833622.7
virulence protein rhum/fic/doc family proteinFLUTA_RS15715Not AvailableNegative3608638 - 360960937286.7
plasmid pria4b orf-3 family proteinFLUTA_RS15720Not AvailableNegative3609616 - 361021523315.3
type ii crispr rna-guided endonuclease cas9FLUTA_RS15725Not AvailableNegative3610221 - 3614597170981.0
23s rrna pseudouridine(2604) synthase rlufFLUTA_RS15730Not AvailableNegative3614991 - 361590834084.4
hypothetical proteinFLUTA_RS15735Not AvailableNegative3616003 - 361656621210.6
glycoside hydrolase family 3 n-terminal domain-containing proteinFLUTA_RS15740Not AvailableNegative3616688 - 361786342077.4
t9ss type a sorting domain-containing proteinFLUTA_RS15745Not AvailableNegative3618039 - 361954152949.9
metal-dependent hydrolaseFLUTA_RS15750Not AvailableNegative3619682 - 362069538560.1

Displaying genes 3141 – 3150 of 4068 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.