Fluviicola taffensis DSM 16823

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Crocinitomicaceae

Genus

Fluviicola

Description

Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) is a strictly aerobic, yellow-orange-pigmented, motile, Gram-negative bacterium isolated from water of the River Taff, Cardiff, UK, during January 2000. The cells are non-flagellated, rod-shaped. They are 0.4-0.5 mm wide and 1.5-5.7 mm long, with rarer longer filaments of up to 51 mm in length. Colonies are 1-5 mm in diameter, circular, flat, transparent, shiny, yellow-orange and creamy on high nutrient solid media. It is motile by gliding. Growth occurs between 4-25 degrees Celsius, with an optimum at about 20 degrees Celsius. It is able to hydrolyze DNA and gelatin, but not agar, arginine, aesculin or starch. Acid is not produced from glucose. F.taffensis is resistant to chloramphenicol, streptomycin and kanamycin, but susceptible to penicillin G, ampicillin, rifampicin and tetracycline. (Adapted from PMID: 16166730). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyCrocinitomicaceae
GenusFluviicola
SpeciesFluviicola taffensis
StrainDSM 16823

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Fluviicola taffensis DSM 16823
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature20
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityNo

Genome Summary

Fluviicola taffensis DSM 16823, complete sequence.

Gene Summary

Adenine Count

1474758 bp

Thymine Count

1467810 bp

Guanine Count

846439 bp

Cytosine Count

844570 bp

Genome Length

4633577 bp

Protein-coding Genes

4018 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp endopeptidase proteolytic subunit clppFLUTA_RS11520Not AvailablePositive2636735 - 263740324926.2
atp-dependent clp protease atp-binding subunit clpxFLUTA_RS11525Not AvailablePositive2637481 - 263870145008.5
hypothetical proteinFLUTA_RS11530Not AvailableNegative2638810 - 263964332330.9
trna (guanosine(46)-n7)-methyltransferase trmbFLUTA_RS11535Not AvailableNegative2639744 - 264042426475.7
kup/hak/kt family potassium transporterFLUTA_RS11540Not AvailablePositive2640538 - 264247273233.6
glycosyltransferaseFLUTA_RS11545Not AvailablePositive2642476 - 264337834767.8
atp-binding proteinFLUTA_RS11550Not AvailableNegative2643635 - 264472041178.8
response regulator transcription factorFLUTA_RS11555Not AvailableNegative2644717 - 264540626095.7
trna pseudouridine(38-40) synthase truaFLUTA_RS11560Not AvailablePositive2645574 - 264634429519.2
histidine kinaseFLUTA_RS11565Not AvailablePositive2646376 - 2649273111681.0

Displaying genes 2301 – 2310 of 4068 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.