Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | JAM7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 2-thiocytidine(32) synthetase ttca | Q7C_RS03320 | Not Available | Positive | 735967 - 736830 | 32776.4 |
| voc family protein | Q7C_RS03325 | Not Available | Negative | 737108 - 737494 | 14283.7 |
| dmt family transporter | Q7C_RS03330 | Not Available | Negative | 737548 - 738435 | 31932.5 |
| succinyldiaminopimelate transaminase | Q7C_RS03335 | Not Available | Positive | 738509 - 739705 | 44155.8 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | Q7C_RS03340 | Not Available | Positive | 739721 - 740542 | 29244.0 |
| arsc family reductase | Q7C_RS03345 | Not Available | Positive | 740641 - 740985 | 13324.1 |
| succinyl-diaminopimelate desuccinylase | Q7C_RS03350 | Not Available | Positive | 740975 - 742114 | 41294.0 |
| hypothetical protein | Q7C_RS03355 | Not Available | Positive | 742119 - 742415 | 11023.4 |
| tonb-dependent receptor | Q7C_RS03360 | Not Available | Positive | 742494 - 744719 | 81811.9 |
| duf4870 family protein | Q7C_RS03365 | Not Available | Positive | 744829 - 745179 | 13210.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
