Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | JAM7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | Q7C_RS02285 | Not Available | Positive | 498198 - 498449 | 9394.19 |
| is3 family transposase | Q7C_RS02290 | Not Available | Positive | 498505 - 499373 | 32568.2 |
| duf6475 domain-containing protein | Q7C_RS02295 | Not Available | Positive | 499360 - 500022 | 24863.6 |
| lytic transglycosylase domain-containing protein | Q7C_RS02300 | Not Available | Positive | 500009 - 500557 | 20344.3 |
| flagellar transcriptional regulator flhd | Q7C_RS02305 | Not Available | Positive | 500554 - 500853 | 11042.2 |
| flhc family transcriptional regulator | Q7C_RS02310 | Not Available | Positive | 500850 - 501383 | 19931.5 |
| entry exclusion protein eexs | Q7C_RS13450 | Not Available | Positive | 501441 - 501872 | 16132.2 |
| conjugal transfer protein trag n-terminal domain-containing protein | Q7C_RS02320 | Not Available | Negative | 501905 - 505474 | 127576.0 |
| conjugal transfer protein trah | Q7C_RS02325 | Not Available | Negative | 505478 - 506866 | 49652.2 |
| thioredoxin family protein | Q7C_RS02330 | Not Available | Negative | 506869 - 507813 | 35182.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
