Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | JAM7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | Q7C_RS02040 | Not Available | Negative | 446623 - 447984 | 51876.8 |
| response regulator transcription factor | Q7C_RS02045 | Not Available | Negative | 447981 - 448664 | 25579.1 |
| degq family serine endoprotease | Q7C_RS02050 | Not Available | Negative | 448788 - 450221 | 51567.7 |
| soxr reducing system rsec family protein | Q7C_RS02055 | Not Available | Negative | 450218 - 450643 | 15395.0 |
| mucb/rseb c-terminal domain-containing protein | Q7C_RS02060 | Not Available | Negative | 450640 - 451620 | 36435.2 |
| sigma-e factor negative regulatory protein | Q7C_RS02065 | Not Available | Negative | 451623 - 452198 | 20964.9 |
| rna polymerase sigma factor rpoe | Q7C_RS02070 | Not Available | Negative | 452202 - 452777 | 21697.8 |
| l-aspartate oxidase | Q7C_RS02075 | Not Available | Positive | 452906 - 454510 | 58963.1 |
| protein ygfx | Q7C_RS02080 | Not Available | Negative | 454485 - 454904 | 15782.8 |
| ygfz/gcvt domain-containing protein | Q7C_RS02085 | Not Available | Positive | 454967 - 455863 | 33289.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
