Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | JAM7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2789 domain-containing protein | Q7C_RS12205 | Not Available | Positive | 2540066 - 2540296 | 8942.49 |
| monofunctional biosynthetic peptidoglycan transglycosylase | Q7C_RS12210 | Not Available | Positive | 2540341 - 2541048 | 26999.9 |
| rt0821/lpp0805 family surface protein | Q7C_RS12215 | Not Available | Positive | 2541161 - 2541607 | 15563.3 |
| iron uptake protein | Q7C_RS12220 | Not Available | Positive | 2542581 - 2542901 | 11203.2 |
| pepsy-associated tm helix domain-containing protein | Q7C_RS12225 | Not Available | Positive | 2542901 - 2544607 | 63610.9 |
| duf3325 domain-containing protein | Q7C_RS12230 | Not Available | Positive | 2544597 - 2544926 | 11834.8 |
| pas domain-containing protein | Q7C_RS12235 | Not Available | Positive | 2545226 - 2549149 | 148395.0 |
| diguanylate cyclase | Q7C_RS12240 | Not Available | Positive | 2549258 - 2550970 | 64134.3 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | Q7C_RS12245 | Not Available | Negative | 2551005 - 2552408 | 51462.1 |
| hypothetical protein | Q7C_RS12250 | Not Available | Positive | 2552669 - 2553088 | 15237.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
