Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | JAM7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps-assembly protein lptd | Q7C_RS12005 | Not Available | Positive | 2494175 - 2496439 | 85879.4 |
| peptidylprolyl isomerase | Q7C_RS12010 | Not Available | Positive | 2496547 - 2497812 | 47316.8 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | Q7C_RS12015 | Not Available | Positive | 2497812 - 2498807 | 34699.9 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | Q7C_RS12020 | Not Available | Positive | 2498804 - 2499616 | 30044.4 |
| hu family dna-binding protein | Q7C_RS12025 | Not Available | Positive | 2499809 - 2500081 | 9215.12 |
| Trna-val | Not Available | Not Available | Positive | 2500093 - 2500168 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 2500179 - 2500255 | Not Available |
| sura n-terminal domain-containing protein | Q7C_RS12040 | Not Available | Positive | 2500335 - 2502233 | 69926.0 |
| dicarboxylate/amino acid:cation symporter | Q7C_RS12045 | Not Available | Negative | 2502266 - 2503483 | 42892.8 |
| enoyl-acp reductase | Q7C_RS12050 | Not Available | Negative | 2503564 - 2504352 | 27439.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
