Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | JAM7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ychj family protein | Q7C_RS11760 | Not Available | Negative | 2442758 - 2443222 | 17284.7 |
| nucleoside-diphosphate sugar epimerase | Q7C_RS11765 | Not Available | Negative | 2443212 - 2444009 | 29535.3 |
| hypothetical protein | Q7C_RS11770 | Not Available | Positive | 2444110 - 2444640 | 19958.6 |
| cnnm domain-containing protein | Q7C_RS11775 | Not Available | Positive | 2444716 - 2445753 | 39300.1 |
| tigr02281 family clan aa aspartic protease | Q7C_RS11780 | Not Available | Positive | 2445819 - 2446328 | 18208.2 |
| lytic transglycosylase domain-containing protein | Q7C_RS11785 | Not Available | Negative | 2446325 - 2447011 | 25141.7 |
| copd family protein | Q7C_RS11790 | Not Available | Negative | 2447015 - 2447476 | 17266.2 |
| fumarate hydratase | Q7C_RS11795 | Not Available | Negative | 2447489 - 2449018 | 55364.9 |
| proline--trna ligase | Q7C_RS11800 | Not Available | Negative | 2449024 - 2450733 | 62555.8 |
| phenylpyruvate tautomerase mif-related protein | Q7C_RS11805 | Not Available | Negative | 2450797 - 2451132 | 12106.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
