Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | JAM7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| saccharopine dehydrogenase family protein | Q7C_RS00760 | Not Available | Negative | 160263 - 161462 | 44443.0 |
| biosynthetic arginine decarboxylase | Q7C_RS00765 | Not Available | Negative | 161523 - 163466 | 73260.9 |
| succinylglutamate desuccinylase/aspartoacylase family protein | Q7C_RS00770 | Not Available | Negative | 163577 - 164632 | 38284.6 |
| 30s ribosomal protein s6--l-glutamate ligase | Q7C_RS00775 | Not Available | Negative | 164632 - 165537 | 32623.1 |
| atp-dependent zinc protease | Q7C_RS00780 | Not Available | Negative | 165534 - 166031 | 18300.6 |
| pilin | Q7C_RS13810 | Not Available | Negative | 166249 - 166671 | 14896.7 |
| pgll family o-oligosaccharyltransferase | Q7C_RS00790 | Not Available | Negative | 166813 - 168522 | 63413.9 |
| tetratricopeptide repeat protein | Q7C_RS00795 | Not Available | Negative | 168577 - 170166 | 59422.3 |
| metal-dependent hydrolase | Q7C_RS00800 | Not Available | Positive | 170273 - 171304 | 39065.5 |
| duf2063 domain-containing protein | Q7C_RS00805 | Not Available | Negative | 171281 - 172012 | 27628.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
