Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | JAM7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system f family protein | Q7C_RS10670 | Not Available | Negative | 2217112 - 2218353 | 45097.1 |
| type iv-a pilus assembly atpase pilb | Q7C_RS10675 | Not Available | Negative | 2218357 - 2220075 | 63138.9 |
| lps translocon maturation chaperone lptm | Q7C_RS13555 | Not Available | Positive | 2220218 - 2220346 | 4468.48 |
| diaminopimelate decarboxylase | Q7C_RS10680 | Not Available | Positive | 2220353 - 2221600 | 44488.0 |
| diaminopimelate epimerase | Q7C_RS10685 | Not Available | Positive | 2221601 - 2222452 | 30438.5 |
| duf484 family protein | Q7C_RS10690 | Not Available | Positive | 2222428 - 2223132 | 26029.1 |
| tyrosine recombinase xerc | Q7C_RS10695 | Not Available | Positive | 2223116 - 2224036 | 35335.4 |
| dna polymerase i | Q7C_RS10700 | Not Available | Negative | 2224099 - 2226813 | 101406.0 |
| duf2782 domain-containing protein | Q7C_RS10705 | Not Available | Positive | 2226905 - 2227237 | 12352.7 |
| homoserine kinase | Q7C_RS10710 | Not Available | Positive | 2227260 - 2228216 | 35952.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
