Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | JAM7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxysqualene dehydroxylase hpne | Q7C_RS10390 | Not Available | Negative | 2160887 - 2162173 | 47055.2 |
| presqualene diphosphate synthase hpnd | Q7C_RS10395 | Not Available | Negative | 2162185 - 2163021 | 32149.4 |
| octaprenyl diphosphate synthase | Q7C_RS10400 | Not Available | Negative | 2163063 - 2164031 | 35470.2 |
| 50s ribosomal protein l21 | Q7C_RS10405 | Not Available | Positive | 2164190 - 2164501 | 11305.8 |
| 50s ribosomal protein l27 | Q7C_RS10410 | Not Available | Positive | 2164539 - 2164796 | 9194.1 |
| obg family gtpase cgta | Q7C_RS10415 | Not Available | Positive | 2164883 - 2165926 | 38018.2 |
| glutamate 5-kinase | Q7C_RS10420 | Not Available | Positive | 2165929 - 2167059 | 40700.1 |
| 30s ribosomal protein s20 | Q7C_RS10425 | Not Available | Negative | 2167122 - 2167382 | 9362.45 |
| exodeoxyribonuclease iii | Q7C_RS10430 | Not Available | Positive | 2167489 - 2168271 | 30113.2 |
| dna helicase recq | Q7C_RS10435 | Not Available | Negative | 2168268 - 2170394 | 79657.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
