Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | JAM7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fluoride efflux transporter crcb | Q7C_RS10340 | Not Available | Positive | 2152641 - 2153015 | 13290.8 |
| duf190 domain-containing protein | Q7C_RS10345 | Not Available | Positive | 2153012 - 2153308 | 11196.8 |
| serine--trna ligase | Q7C_RS10350 | Not Available | Positive | 2153321 - 2154595 | 47077.8 |
| site-2 protease family protein | Q7C_RS10355 | Not Available | Positive | 2154588 - 2155280 | 24826.5 |
| tryptophan--trna ligase | Q7C_RS10360 | Not Available | Positive | 2155305 - 2156483 | 43948.1 |
| tryptophan--trna ligase | Q7C_RS10365 | Not Available | Negative | 2156516 - 2157532 | 37664.1 |
| 23s rrna pseudouridine(2605) synthase rlub | Q7C_RS10370 | Not Available | Positive | 2157765 - 2158682 | 34590.6 |
| ggdef domain-containing protein | Q7C_RS10375 | Not Available | Negative | 2158679 - 2159596 | 34127.7 |
| sdr family nad(p)-dependent oxidoreductase | Q7C_RS10380 | Not Available | Negative | 2159688 - 2160458 | 27446.8 |
| hypothetical protein | Q7C_RS10385 | Not Available | Negative | 2160445 - 2160816 | 13545.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
