Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | JAM7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase (atp-hydrolyzing) subunit b | Q7C_RS09585 | Not Available | Positive | 2004869 - 2007289 | 90359.9 |
| nad(p)/fad-dependent oxidoreductase | Q7C_RS09590 | Not Available | Negative | 2007392 - 2008705 | 48052.1 |
| flavoprotein | Q7C_RS09595 | Not Available | Positive | 2008848 - 2009408 | 20956.8 |
| duf6513 domain-containing protein | Q7C_RS09600 | Not Available | Positive | 2009401 - 2010957 | 58088.7 |
| duf447 domain-containing protein | Q7C_RS09605 | Not Available | Positive | 2010945 - 2011523 | 21740.8 |
| (5-formylfuran-3-yl)methyl phosphate synthase | Q7C_RS09610 | Not Available | Positive | 2011513 - 2012199 | 24444.4 |
| dna ligase | Q7C_RS09615 | Not Available | Positive | 2012259 - 2013125 | 32236.7 |
| hypothetical protein | Q7C_RS09620 | Not Available | Positive | 2013373 - 2014116 | 27792.6 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | Q7C_RS09625 | Not Available | Negative | 2014360 - 2016639 | 85744.1 |
| response regulator | Q7C_RS09630 | Not Available | Negative | 2016844 - 2017641 | 29512.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
