Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | JAM7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | Q7C_RS09535 | Not Available | Negative | 1996550 - 1997299 | 26856.0 |
| imidazole glycerol phosphate synthase subunit hish | Q7C_RS09540 | Not Available | Negative | 1997324 - 1997956 | 22937.3 |
| imidazoleglycerol-phosphate dehydratase hisb | Q7C_RS09545 | Not Available | Negative | 1997991 - 1998584 | 21632.0 |
| fumarate/nitrate reduction transcriptional regulator fnr | Q7C_RS09550 | Not Available | Positive | 1998684 - 1999433 | 27477.3 |
| ompw/alkl family protein | Q7C_RS09555 | Not Available | Positive | 1999519 - 2000193 | 24727.2 |
| murein biosynthesis integral membrane protein murj | Q7C_RS09560 | Not Available | Negative | 2000206 - 2001744 | 55973.3 |
| conjugal transfer protein traf | Q7C_RS09565 | Not Available | Positive | 2001822 - 2002424 | 22959.5 |
| hydrogen peroxide-inducible genes activator | Q7C_RS09570 | Not Available | Negative | 2002413 - 2003324 | 33688.1 |
| rubredoxin | Q7C_RS09575 | Not Available | Positive | 2003433 - 2003597 | 6152.13 |
| dna replication/repair protein recf | Q7C_RS09580 | Not Available | Positive | 2003715 - 2004785 | 41010.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
