Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | JAM7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide mutase | Q7C_RS09290 | Not Available | Positive | 1949255 - 1949764 | 17924.8 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | Q7C_RS09295 | Not Available | Positive | 1949761 - 1950891 | 40499.1 |
| selt/selw/selh family protein | Q7C_RS09300 | Not Available | Positive | 1950891 - 1951169 | 10441.5 |
| type i dna topoisomerase | Q7C_RS09305 | Not Available | Negative | 1951267 - 1953549 | 85222.1 |
| duf494 family protein | Q7C_RS09310 | Not Available | Negative | 1953632 - 1954099 | 18121.6 |
| dna-processing protein dpra | Q7C_RS09315 | Not Available | Negative | 1954122 - 1955198 | 38463.2 |
| lysm peptidoglycan-binding domain-containing protein | Q7C_RS09320 | Not Available | Negative | 1955251 - 1956282 | 38501.9 |
| peptide deformylase | Q7C_RS09325 | Not Available | Positive | 1956554 - 1957057 | 19050.9 |
| methionyl-trna formyltransferase | Q7C_RS09330 | Not Available | Positive | 1957067 - 1957996 | 33828.5 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | Q7C_RS09335 | Not Available | Positive | 1957989 - 1959296 | 48670.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
