Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | JAM7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration dna helicase ruvb | Q7C_RS08345 | Not Available | Negative | 1734646 - 1735659 | 37293.9 |
| holliday junction branch migration protein ruva | Q7C_RS08350 | Not Available | Negative | 1735662 - 1736258 | 21530.2 |
| crossover junction endodeoxyribonuclease ruvc | Q7C_RS08355 | Not Available | Negative | 1736255 - 1736791 | 19443.6 |
| yebc/pmpr family dna-binding transcriptional regulator | Q7C_RS08360 | Not Available | Negative | 1736805 - 1737554 | 27032.5 |
| branched-chain amino acid transaminase | Q7C_RS08365 | Not Available | Negative | 1737582 - 1738511 | 34883.6 |
| bifunctional | Q7C_RS08370 | Not Available | Negative | 1738543 - 1741347 | 105715.0 |
| alternative oxidase | Q7C_RS08375 | Not Available | Positive | 1741519 - 1742139 | 23931.7 |
| duf6164 family protein | Q7C_RS08380 | Not Available | Positive | 1742198 - 1742560 | 13753.6 |
| chaperonin groel | Q7C_RS08385 | Not Available | Negative | 1743048 - 1744679 | 57219.8 |
| co-chaperone groes | Q7C_RS08390 | Not Available | Negative | 1744743 - 1745036 | 10505.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
