Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | JAM7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | Q7C_RS07735 | Not Available | Positive | 1614735 - 1615952 | 45162.0 |
| trna adenosine(34) deaminase tada | Q7C_RS07740 | Not Available | Positive | 1615933 - 1616391 | 16918.6 |
| membrane-bound lytic murein transglycosylase mltf | Q7C_RS07745 | Not Available | Positive | 1616477 - 1617892 | 53764.0 |
| thiol:disulfide interchange protein dsba/dsbl | Q7C_RS07750 | Not Available | Negative | 1617941 - 1618573 | 23945.8 |
| c-type cytochrome biogenesis protein ccsb | Q7C_RS07755 | Not Available | Negative | 1618591 - 1619736 | 43425.3 |
| cytochrome c biogenesis protein resb | Q7C_RS07760 | Not Available | Negative | 1619795 - 1621801 | 75099.3 |
| c-type cytochrome | Q7C_RS07765 | Not Available | Negative | 1621866 - 1622474 | 21004.9 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | Q7C_RS07770 | Not Available | Positive | 1622561 - 1623181 | 22765.5 |
| glycogen/starch/alpha-glucan phosphorylase | Q7C_RS07780 | Not Available | Positive | 1623599 - 1626103 | 94604.6 |
| Trna-arg | Not Available | Not Available | Positive | 1626221 - 1626297 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
