Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | JAM7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtpase ylqf | Q7C_RS07685 | Not Available | Negative | 1606207 - 1607130 | 34229.3 |
| yban family protein | Q7C_RS07690 | Not Available | Positive | 1607317 - 1607709 | 14905.9 |
| hopj type iii effector protein | Q7C_RS07695 | Not Available | Positive | 1607785 - 1608129 | 12892.2 |
| phosphoglycerate dehydrogenase | Q7C_RS07700 | Not Available | Positive | 1608276 - 1609505 | 44853.0 |
| d-lactate dehydrogenase | Q7C_RS07705 | Not Available | Negative | 1609553 - 1611253 | 63609.2 |
| undecaprenyl-diphosphate phosphatase | Q7C_RS07710 | Not Available | Positive | 1611368 - 1612165 | 29251.9 |
| 50s ribosomal protein l13 | Q7C_RS07715 | Not Available | Positive | 1612252 - 1612680 | 15881.6 |
| 30s ribosomal protein s9 | Q7C_RS07720 | Not Available | Positive | 1612692 - 1613081 | 14542.7 |
| acyloxyacyl hydrolase | Q7C_RS07725 | Not Available | Positive | 1613194 - 1613676 | 17361.7 |
| lipid a biosynthesis acyltransferase | Q7C_RS07730 | Not Available | Negative | 1613688 - 1614530 | 32043.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
