Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | JAM7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase beta subunit | Q7C_RS07025 | Not Available | Positive | 1481111 - 1482658 | 55600.4 |
| formate dehydrogenase subunit alpha | Q7C_RS07030 | Not Available | Positive | 1482662 - 1485532 | 104945.0 |
| formate dehydrogenase accessory sulfurtransferase fdhd | Q7C_RS07035 | Not Available | Positive | 1485532 - 1486347 | 29260.2 |
| formate dehydrogenase subunit delta | Q7C_RS07040 | Not Available | Positive | 1486360 - 1486602 | 8732.29 |
| ofa family mfs transporter | Q7C_RS07045 | Not Available | Positive | 1486681 - 1488411 | 62302.7 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | Q7C_RS07050 | Not Available | Negative | 1488448 - 1489920 | 54916.2 |
| tyrosine-type recombinase/integrase | Q7C_RS13990 | Not Available | Negative | 1489927 - 1490100 | 6338.64 |
| is3 family transposase | Q7C_RS07055 | Not Available | Negative | 1490159 - 1490908 | 29022.5 |
| hypothetical protein | Q7C_RS07060 | Not Available | Positive | 1491101 - 1491412 | 11287.5 |
| hypothetical protein | Q7C_RS07065 | Not Available | Positive | 1491668 - 1492573 | 35117.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
