Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | JAM7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phnd/ssua/transferrin family substrate-binding protein | Q7C_RS00295 | Not Available | Negative | 62483 - 63232 | 28359.2 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | Q7C_RS00300 | Not Available | Negative | 63274 - 64935 | 62281.2 |
| collagen-like triple helix repeat-containing protein | Q7C_RS00305 | Not Available | Negative | 65059 - 67311 | 70626.3 |
| response regulator transcription factor | Q7C_RS00310 | Not Available | Positive | 67763 - 68155 | 14509.7 |
| response regulator | Q7C_RS00315 | Not Available | Positive | 68230 - 68841 | 23030.1 |
| sensor histidine kinase | Q7C_RS00320 | Not Available | Positive | 68907 - 70043 | 42187.2 |
| is3 family transposase | Q7C_RS00325 | Not Available | Negative | 70152 - 70559 | 14936.5 |
| is3 family transposase | Q7C_RS00340 | Not Available | Positive | 70709 - 73689 | 107623.0 |
| hypothetical protein | Q7C_RS13745 | Not Available | Negative | 73779 - 74315 | 20394.3 |
| type ii toxin-antitoxin system vapc family toxin | Q7C_RS00350 | Not Available | Negative | 74327 - 74722 | 13701.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
