Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | JAM7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor family protein | Q7C_RS05555 | Not Available | Negative | 1193687 - 1195786 | 77040.2 |
| fepa family tonb-dependent siderophore receptor | Q7C_RS05560 | Not Available | Positive | 1196306 - 1198486 | 80659.0 |
| lipoyl synthase | Q7C_RS05565 | Not Available | Negative | 1198735 - 1199688 | 35484.9 |
| lipoyl(octanoyl) transferase lipb | Q7C_RS05570 | Not Available | Negative | 1199685 - 1200296 | 22739.3 |
| ybed family protein | Q7C_RS05575 | Not Available | Negative | 1200296 - 1200571 | 10074.9 |
| aminotransferase class iv | Q7C_RS13680 | Not Available | Negative | 1200568 - 1201419 | 31057.6 |
| d-alanyl-d-alanine carboxypeptidase family protein | Q7C_RS13685 | Not Available | Negative | 1201423 - 1202562 | 42134.4 |
| septal ring lytic transglycosylase rlpa family protein | Q7C_RS05590 | Not Available | Negative | 1202601 - 1203449 | 30622.4 |
| lytic murein transglycosylase b | Q7C_RS05595 | Not Available | Negative | 1203449 - 1204429 | 36773.8 |
| rod shape-determining protein roda | Q7C_RS05600 | Not Available | Negative | 1204426 - 1205556 | 41160.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
