Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | JAM7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrite reductase large subunit nirb | Q7C_RS05100 | Not Available | Negative | 1097940 - 1100372 | 89191.8 |
| yybh family protein | Q7C_RS05105 | Not Available | Negative | 1100592 - 1101047 | 16270.7 |
| marr family winged helix-turn-helix transcriptional regulator | Q7C_RS05110 | Not Available | Negative | 1101075 - 1101590 | 19339.4 |
| ycjx family protein | Q7C_RS05115 | Not Available | Positive | 1101692 - 1103104 | 53857.0 |
| tigr01620 family protein | Q7C_RS05120 | Not Available | Positive | 1103101 - 1104135 | 38915.4 |
| chase domain-containing protein | Q7C_RS13290 | Not Available | Negative | 1104117 - 1106816 | 102758.0 |
| hypothetical protein | Q7C_RS05130 | Not Available | Negative | 1107038 - 1108024 | 36740.0 |
| hypothetical protein | Q7C_RS05135 | Not Available | Negative | 1108149 - 1110749 | 95352.5 |
| hypothetical protein | Q7C_RS05140 | Not Available | Negative | 1110815 - 1111564 | 26980.9 |
| hypothetical protein | Q7C_RS05145 | Not Available | Positive | 1111805 - 1112185 | 13801.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
