Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga frappieri |
| Strain | JAM7 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
705888 bp
Thymine Count
702259 bp
Guanine Count
632271 bp
Cytosine Count
657047 bp
Genome Length
2697465 bp
Protein-coding Genes
2506 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 1057889 - 1057975 | Not Available |
| ribonuclease r | Q7C_RS04960 | Not Available | Positive | 1058016 - 1060184 | 81615.9 |
| Trna-his | Not Available | Not Available | Positive | 1060284 - 1060359 | Not Available |
| hdod domain-containing protein | Q7C_RS04970 | Not Available | Positive | 1060380 - 1061261 | 32827.1 |
| Trna-thr | Not Available | Not Available | Positive | 1061332 - 1061407 | Not Available |
| type i-f crispr-associated endoribonuclease cas6/csy4 | Q7C_RS04980 | Not Available | Negative | 1066331 - 1066882 | 20725.7 |
| type i-f crispr-associated protein csy3 | Q7C_RS04985 | Not Available | Negative | 1066894 - 1067919 | 37545.4 |
| type i-f crispr-associated protein csy2 | Q7C_RS04990 | Not Available | Negative | 1067940 - 1068881 | 35072.9 |
| type i-f crispr-associated protein csy1 | Q7C_RS04995 | Not Available | Negative | 1068878 - 1070143 | 48443.6 |
| type i-f crispr-associated helicase cas3f | Q7C_RS05000 | Not Available | Negative | 1070136 - 1073534 | 128303.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
