Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga nitratireducenticrescens |
| Strain | JAM1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
864479 bp
Thymine Count
868804 bp
Guanine Count
706065 bp
Cytosine Count
697750 bp
Genome Length
3137100 bp
Protein-coding Genes
2949 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps translocon maturation chaperone lptm | Q7A_RS03050 | Not Available | Positive | 653858 - 653986 | 4479.63 |
| diaminopimelate decarboxylase | Q7A_RS03055 | Not Available | Positive | 653989 - 655242 | 45353.1 |
| diaminopimelate epimerase | Q7A_RS03060 | Not Available | Positive | 655247 - 656095 | 30718.6 |
| duf484 family protein | Q7A_RS03065 | Not Available | Positive | 656071 - 656781 | 26719.7 |
| tyrosine recombinase xerc | Q7A_RS03070 | Not Available | Positive | 656783 - 657679 | 34251.0 |
| sodium:calcium antiporter | Q7A_RS03075 | Not Available | Positive | 657934 - 658953 | 35901.7 |
| is110 family transposase | Q7A_RS03080 | Not Available | Negative | 659447 - 660484 | 38032.6 |
| deoxyribodipyrimidine photo-lyase | Q7A_RS03085 | Not Available | Negative | 660661 - 662058 | 53846.1 |
| cryptochrome/photolyase family protein | Q7A_RS03090 | Not Available | Negative | 662068 - 663600 | 59384.7 |
| duf3429 domain-containing protein | Q7A_RS03095 | Not Available | Negative | 663593 - 664006 | 15728.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
