Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Piscirickettsiaceae
Genus
Methylophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Piscirickettsiaceae |
| Genus | Methylophaga |
| Species | Methylophaga nitratireducenticrescens |
| Strain | JAM1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
864479 bp
Thymine Count
868804 bp
Guanine Count
706065 bp
Cytosine Count
697750 bp
Genome Length
3137100 bp
Protein-coding Genes
2949 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | Q7A_RS01585 | Not Available | Negative | 344090 - 345106 | 36036.5 |
| 30s ribosomal protein s21 | Q7A_RS01590 | Not Available | Positive | 345259 - 345474 | 8145.9 |
| gatb/yqey domain-containing protein | Q7A_RS01595 | Not Available | Positive | 345498 - 345959 | 16595.9 |
| dna primase | Q7A_RS01600 | Not Available | Positive | 346028 - 347752 | 64968.0 |
| rna polymerase sigma factor rpod | Q7A_RS01605 | Not Available | Positive | 347848 - 349686 | 69281.6 |
| Trna-met | Not Available | Not Available | Positive | 349697 - 349773 | Not Available |
| site-specific integrase | Q7A_RS01615 | Not Available | Negative | 349780 - 350925 | 43714.3 |
| helix-turn-helix transcriptional regulator | Q7A_RS01630 | Not Available | Positive | 351554 - 352252 | 26612.0 |
| plasmid mobilization protein | Q7A_RS01635 | Not Available | Positive | 352422 - 352787 | 14037.0 |
| relaxase/mobilization nuclease domain-containing protein | Q7A_RS01640 | Not Available | Positive | 352768 - 354573 | 68174.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
