Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquitin-protein ligase | ABT58_14640 | Not Available | Negative | 3372115 - 3373035 | 34262.7 |
| tyrosine transporter tyrp | ABT58_14645 | Not Available | Negative | 3373286 - 3374494 | 42562.5 |
| hypothetical protein | ABT58_14650 | Not Available | Positive | 3374951 - 3376267 | 47590.6 |
| putrescine transporter | ABT58_14655 | Not Available | Positive | 3376623 - 3378005 | 48872.2 |
| arginine decarboxylase | ABT58_14660 | Not Available | Positive | 3378169 - 3380463 | 85486.7 |
| (2fe-2s)-binding protein | ABT58_14665 | Not Available | Negative | 3380516 - 3380833 | 11420.4 |
| ribonucleotide-diphosphate reductase subunit beta | ABT58_14670 | Not Available | Negative | 3380830 - 3381963 | 43294.2 |
| ribonucleotide-diphosphate reductase subunit alpha | ABT58_14675 | Not Available | Negative | 3382010 - 3384277 | 84896.9 |
| had family hydrolase | ABT58_14680 | Not Available | Negative | 3384764 - 3385432 | 24265.2 |
| 3-demethylubiquinone-9 3-methyltransferase | ABT58_14685 | Not Available | Negative | 3385612 - 3386319 | 26245.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
