Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_5852 | Not Available | Positive | 716479 - 717627 | 42380.2 |
| structural protein p5 | JCM19237_5853 | Not Available | Positive | 717810 - 718214 | 15236.1 |
| hypothetical protein | JCM19237_5854 | Not Available | Positive | 718309 - 718506 | 6557.09 |
| hypothetical protein | JCM19237_5855 | Not Available | Positive | 718516 - 718671 | 5531.73 |
| s-adenosylhomocysteine hydrolase | JCM19237_5856 | Not Available | Negative | 718687 - 719052 | 14394.3 |
| hypothetical protein | JCM19237_5857 | Not Available | Negative | 719049 - 719171 | 4343.29 |
| translation initiation factor sui1-related protein | JCM19237_5858 | Not Available | Negative | 719911 - 720234 | 11490.1 |
| had superfamily hydrolase | JCM19237_5859 | Not Available | Positive | 720349 - 720915 | 21853.4 |
| protein of unknown function duf785 | JCM19237_5860 | Not Available | Positive | 721049 - 721558 | 19062.8 |
| hypothetical protein | JCM19237_5861 | Not Available | Negative | 721630 - 721845 | 8216.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
