Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase | ABT58_13935 | Not Available | Positive | 3214272 - 3215243 | 36216.8 |
| transcriptional regulator | ABT58_13940 | Not Available | Negative | 3215575 - 3215970 | 14912.8 |
| hypothetical protein | ABT58_13945 | Not Available | Positive | 3216622 - 3218193 | 55629.7 |
| thymidine kinase | ABT58_13950 | Not Available | Positive | 3218370 - 3218948 | 21753.0 |
| phosphoribosyl-atp pyrophosphatase | ABT58_13955 | Not Available | Negative | 3219039 - 3219650 | 22087.2 |
| imidazole glycerol phosphate synthase | ABT58_13960 | Not Available | Negative | 3219647 - 3220420 | 28318.8 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | ABT58_13965 | Not Available | Negative | 3220430 - 3221164 | 26048.9 |
| imidazole glycerol phosphate synthase | ABT58_13970 | Not Available | Negative | 3221178 - 3221801 | 22496.3 |
| imidazoleglycerol-phosphate dehydratase | ABT58_13975 | Not Available | Negative | 3221801 - 3222871 | 39604.4 |
| histidinol-phosphate aminotransferase | ABT58_13980 | Not Available | Negative | 3222886 - 3223938 | 38749.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
