Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_5822 | Not Available | Negative | 698594 - 698770 | 6516.2 |
| rna polymerase sigma factor rpos | JCM19237_5823 | Not Available | Negative | 699077 - 699952 | 33059.2 |
| 5'-nucleotidase | JCM19237_5824 | Not Available | Positive | 701105 - 702058 | 35761.4 |
| hypothetical protein | JCM19237_5825 | Not Available | Positive | 702748 - 703047 | 11152.7 |
| predicted atp-dependent endonuclease old family | JCM19237_5826 | Not Available | Positive | 703174 - 704400 | 46125.2 |
| mobile element protein | JCM19237_5827 | Not Available | Negative | 705102 - 705320 | 8383.12 |
| mobile element protein | JCM19237_5828 | Not Available | Negative | 705329 - 705646 | 12042.8 |
| putative phage protein vpf148 | JCM19237_5829 | Not Available | Negative | 705801 - 706031 | 8933.65 |
| hypothetical protein | JCM19237_5830 | Not Available | Positive | 706257 - 706442 | 6734.26 |
| phage protein | JCM19237_5831 | Not Available | Positive | 706439 - 706987 | 20579.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
