Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-adenosyl-l-methionine dependent methyltransferase | JCM19237_5782 | Not Available | Positive | 667335 - 667766 | 16142.3 |
| s-adenosyl-l-methionine dependent methyltransferase | JCM19237_5783 | Not Available | Positive | 667723 - 668265 | 20332.3 |
| cyclopropane-fatty-acyl-phospholipid synthase | JCM19237_5784 | Not Available | Positive | 668310 - 668573 | 10388.3 |
| hypothetical protein | JCM19237_5785 | Not Available | Positive | 668745 - 669110 | 13436.8 |
| hypothetical periplasmic protein | JCM19237_5786 | Not Available | Positive | 669174 - 669734 | 21483.7 |
| putative lipoprotein precursor | JCM19237_5787 | Not Available | Positive | 669937 - 670449 | 19345.9 |
| sensor histidine kinase | JCM19237_5788 | Not Available | Positive | 670865 - 672706 | 68236.9 |
| predicted atp-dependent endonuclease of the old family ybjd subgroup | JCM19237_5789 | Not Available | Negative | 672830 - 673534 | 26893.9 |
| predicted atp-dependent endonuclease of the old family ybjd subgroup | JCM19237_5790 | Not Available | Negative | 673519 - 674535 | 39025.9 |
| lactoylglutathione lyase | JCM19237_5791 | Not Available | Positive | 674766 - 675158 | 15040.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
