Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensory box/ggdef family protein | JCM19237_5752 | Not Available | Positive | 642504 - 643442 | 35253.1 |
| rtn protein | JCM19237_5753 | Not Available | Positive | 643454 - 643684 | 8482.27 |
| beta n-acetyl-glucosaminidase | JCM19237_5754 | Not Available | Negative | 643761 - 644156 | 14960.9 |
| beta n-acetyl-glucosaminidase | JCM19237_5755 | Not Available | Negative | 644153 - 644302 | 5432.47 |
| beta n-acetyl-glucosaminidase | JCM19237_5756 | Not Available | Negative | 644260 - 644763 | 18562.2 |
| trap-type uncharacterized transport system fused permease component | JCM19237_5757 | Not Available | Negative | 645036 - 646220 | 43132.4 |
| trap-type uncharacterized transport system fused permease component | JCM19237_5758 | Not Available | Negative | 646217 - 646459 | 8511.65 |
| trap-type uncharacterized transport system fused permease component | JCM19237_5759 | Not Available | Negative | 646459 - 647628 | 41404.5 |
| trap transporter solute receptor taxi family precursor | JCM19237_5760 | Not Available | Negative | 647701 - 648672 | 34840.2 |
| hypothetical protein | JCM19237_5761 | Not Available | Positive | 649350 - 649793 | 15303.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
