Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase | JCM19237_5742 | Not Available | Positive | 632377 - 633393 | 36727.6 |
| predicted membrane protein | JCM19237_5743 | Not Available | Negative | 633501 - 634130 | 23314.3 |
| atp-dependent rna helicase vca0061 | JCM19237_5744 | Not Available | Positive | 634544 - 635884 | 50470.1 |
| dihydrolipoamide acyltransferase component | JCM19237_5745 | Not Available | Negative | 635995 - 636393 | 14676.7 |
| dihydrolipoamide acyltransferase component | JCM19237_5746 | Not Available | Negative | 636390 - 636578 | 6989.27 |
| dihydrolipoamide acyltransferase component | JCM19237_5747 | Not Available | Negative | 636539 - 637195 | 23030.9 |
| branched-chain alpha-keto acid dehydrogenase e1 component beta subunit | JCM19237_5748 | Not Available | Negative | 637192 - 638856 | 60960.9 |
| branched-chain alpha-keto acid dehydrogenase | JCM19237_5749 | Not Available | Negative | 638948 - 639319 | 13529.8 |
| hypothetical protein | JCM19237_5750 | Not Available | Positive | 639838 - 640134 | 11702.6 |
| cobalt-zinc-cadmium resistance protein | JCM19237_5751 | Not Available | Positive | 640545 - 641414 | 32440.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
