Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain acyl-coa dehydrogenase | JCM19237_5732 | Not Available | Positive | 624199 - 624840 | 24005.8 |
| hypothetical protein | JCM19237_5733 | Not Available | Negative | 624919 - 625035 | 4092.68 |
| enoyl-coa hydratase | JCM19237_5734 | Not Available | Positive | 625037 - 625702 | 23631.5 |
| enoyl-coa hydratase | JCM19237_5735 | Not Available | Positive | 625773 - 626999 | 45079.5 |
| 3-hydroxyisobutyrate dehydrogenase | JCM19237_5736 | Not Available | Positive | 627080 - 627985 | 31599.8 |
| 3-oxoacyl-[acyl-carrier protein] reductase | JCM19237_5737 | Not Available | Positive | 628030 - 628809 | 27477.5 |
| adp-ribose pyrophosphatase | JCM19237_5738 | Not Available | Negative | 629103 - 629624 | 19422.1 |
| ggdef domain | JCM19237_5739 | Not Available | Negative | 629802 - 630851 | 38959.3 |
| 2-hydroxymuconic semialdehyde hydrolase | JCM19237_5740 | Not Available | Negative | 631001 - 631963 | 35989.3 |
| hypothetical protein | JCM19237_5741 | Not Available | Positive | 632075 - 632203 | 4441.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
