Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | ABT58_07815 | Not Available | Positive | 1767057 - 1767875 | 29321.3 |
| nitrogen regulatory protein p-ii | ABT58_07820 | Not Available | Positive | 1767865 - 1768215 | 12513.0 |
| cbs domain protein | ABT58_07825 | Not Available | Positive | 1768212 - 1768616 | 15285.8 |
| phosphodiesterase | ABT58_07830 | Not Available | Positive | 1768694 - 1769245 | 19967.7 |
| permease | ABT58_07835 | Not Available | Negative | 1769298 - 1770059 | 26401.4 |
| formate transporter | ABT58_07840 | Not Available | Positive | 1770397 - 1771242 | 30339.2 |
| manganese transport protein mnth | ABT58_07845 | Not Available | Negative | 1771491 - 1772684 | 42252.4 |
| rna-binding protein | ABT58_07850 | Not Available | Positive | 1773334 - 1773792 | 16754.1 |
| glutamate racemase | ABT58_07855 | Not Available | Negative | 1773764 - 1774558 | 28731.0 |
| atpase | ABT58_07860 | Not Available | Negative | 1774646 - 1775305 | 24293.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
