Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylcrotonyl-coa carboxylase carboxyl transferase subunit | JCM19237_5722 | Not Available | Negative | 618415 - 618795 | 13799.0 |
| isovaleryl-coa dehydrogenase | JCM19237_5723 | Not Available | Negative | 618947 - 619723 | 28253.1 |
| isovaleryl-coa dehydrogenase | JCM19237_5724 | Not Available | Negative | 619720 - 620115 | 14264.1 |
| predicted transcriptional regulator liur of leucine degradation pathway merr family | JCM19237_5725 | Not Available | Negative | 620152 - 620517 | 14255.4 |
| 3-ketoacyl-coa thiolase | JCM19237_5726 | Not Available | Positive | 620698 - 621162 | 15630.0 |
| 3-ketoacyl-coa thiolase | JCM19237_5727 | Not Available | Positive | 621153 - 621926 | 27490.7 |
| hypothetical protein | JCM19237_5728 | Not Available | Negative | 621937 - 622062 | 4561.31 |
| methylmalonate-semialdehyde dehydrogenase | JCM19237_5729 | Not Available | Positive | 622106 - 622579 | 17060.6 |
| methylmalonate-semialdehyde dehydrogenase | JCM19237_5730 | Not Available | Positive | 622642 - 623601 | 33607.7 |
| branched-chain acyl-coa dehydrogenase | JCM19237_5731 | Not Available | Positive | 623682 - 624245 | 20406.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
