Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ABT58_06800 | Not Available | Positive | 1546737 - 1547111 | 13793.4 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | ABT58_06805 | Not Available | Positive | 1547398 - 1548204 | 31128.2 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | ABT58_06810 | Not Available | Negative | 1548327 - 1549118 | 29018.1 |
| fis family transcriptional regulator | ABT58_06815 | Not Available | Negative | 1549228 - 1550604 | 49597.7 |
| sam-dependent methyltransferase | ABT58_06820 | Not Available | Negative | 1550827 - 1551405 | 21273.4 |
| hypothetical protein | ABT58_06825 | Not Available | Negative | 1551573 - 1551929 | 13087.2 |
| hypothetical protein | ABT58_06830 | Not Available | Negative | 1552200 - 1552379 | 6562.81 |
| glycerophosphodiester phosphodiesterase | ABT58_06835 | Not Available | Positive | 1552485 - 1553189 | 25519.6 |
| rna helicase | ABT58_06840 | Not Available | Positive | 1553492 - 1554787 | 48493.7 |
| ribokinase | ABT58_06845 | Not Available | Negative | 1554970 - 1555848 | 31380.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
