Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-ketoacyl-acp reductase | ABT58_05895 | Not Available | Positive | 1354618 - 1355397 | 27443.5 |
| 3-ketoacyl-acp reductase | ABT58_05900 | Not Available | Negative | 1355424 - 1355531 | 3917.16 |
| adp-ribose pyrophosphatase | ABT58_05905 | Not Available | Negative | 1355768 - 1356289 | 19453.2 |
| diguanylate cyclase | ABT58_05910 | Not Available | Negative | 1356464 - 1357513 | 39009.4 |
| alpha/beta hydrolase | ABT58_05915 | Not Available | Negative | 1357663 - 1358604 | 35286.1 |
| udp-galactose-4-epimerase | ABT58_05920 | Not Available | Positive | 1358973 - 1359989 | 36746.6 |
| membrane protein | ABT58_05925 | Not Available | Negative | 1360121 - 1360750 | 23357.3 |
| rna helicase | ABT58_05930 | Not Available | Positive | 1361161 - 1362501 | 50466.1 |
| branched-chain alpha-keto acid dehydrogenase subunit e2 | ABT58_05935 | Not Available | Negative | 1362612 - 1363814 | 43406.3 |
| 2-oxoisovalerate dehydrogenase | ABT58_05940 | Not Available | Negative | 1363811 - 1364794 | 35641.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
