Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylglutaryl-coa lyase | ABT58_05840 | Not Available | Negative | 1341870 - 1342796 | 33032.7 |
| hypothetical protein | ABT58_05845 | Not Available | Negative | 1342840 - 1343775 | 33852.2 |
| methylcrotonoyl-coa carboxylase | ABT58_05850 | Not Available | Negative | 1343801 - 1345429 | 58448.2 |
| isovaleryl-coa dehydrogenase | ABT58_05855 | Not Available | Negative | 1345529 - 1346698 | 42084.6 |
| merr family transcriptional regulator | ABT58_05860 | Not Available | Negative | 1346735 - 1347100 | 14255.4 |
| acetyl-coa acetyltransferase | ABT58_05865 | Not Available | Positive | 1347281 - 1348528 | 43421.7 |
| acyl-coa dehydrogenase | ABT58_05875 | Not Available | Positive | 1350269 - 1351429 | 42474.6 |
| enoyl-coa hydratase | ABT58_05880 | Not Available | Positive | 1351511 - 1352293 | 27978.7 |
| enoyl-coa hydratase | ABT58_05885 | Not Available | Positive | 1352363 - 1353589 | 45042.6 |
| 3-hydroxyisobutyrate dehydrogenase | ABT58_05890 | Not Available | Positive | 1353670 - 1354575 | 31569.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
