Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ABT58_05565 | Not Available | Negative | 1281035 - 1281931 | 33432.6 |
| hypothetical protein | ABT58_05570 | Not Available | Negative | 1281965 - 1282834 | 34029.8 |
| gntr family transcriptional regulator | ABT58_05575 | Not Available | Negative | 1283119 - 1284270 | 41917.4 |
| arac family transcriptional regulator | ABT58_05580 | Not Available | Positive | 1284466 - 1285344 | 33663.3 |
| transcriptional regulator | ABT58_05585 | Not Available | Negative | 1285520 - 1286404 | 33026.3 |
| d-xylose-proton symporter | ABT58_05590 | Not Available | Negative | 1286527 - 1287987 | 52583.9 |
| mocc | ABT58_05595 | Not Available | Positive | 1288563 - 1289456 | 32652.1 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase | ABT58_05600 | Not Available | Positive | 1289581 - 1291452 | 67950.8 |
| oxidoreductase | ABT58_05605 | Not Available | Positive | 1291587 - 1292762 | 43840.7 |
| 5-dehydro-2-deoxygluconokinase | ABT58_05610 | Not Available | Positive | 1292775 - 1293770 | 35690.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
