Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator lysr family | JCM19237_4953 | Not Available | Positive | 233 - 1018 | 28827.4 |
| putative efflux protein | JCM19237_4954 | Not Available | Positive | 1294 - 2406 | 39827.7 |
| acriflavin resistance protein | JCM19237_4955 | Not Available | Positive | 2481 - 4535 | 75473.7 |
| acriflavin resistance protein | JCM19237_4956 | Not Available | Positive | 4532 - 4873 | 12565.5 |
| acriflavin resistance protein | JCM19237_4957 | Not Available | Positive | 4870 - 5469 | 21481.1 |
| outer membrane protein oprn | JCM19237_4958 | Not Available | Positive | 5471 - 6265 | 28578.9 |
| rnd efflux system outer membrane lipoprotein cmec | JCM19237_4959 | Not Available | Positive | 6304 - 6798 | 17804.5 |
| rnd efflux system outer membrane lipoprotein cmec | JCM19237_4960 | Not Available | Positive | 6795 - 7103 | 11243.5 |
| hypothetical protein | JCM19237_4961 | Not Available | Positive | 7575 - 8096 | 19211.4 |
| acetyltransferase gnat family | JCM19237_4962 | Not Available | Positive | 8262 - 8726 | 17716.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
