Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| myo-inositol 2-dehydrogenase 1 | JCM19237_5662 | Not Available | Positive | 571466 - 572392 | 33547.0 |
| predicted transcriptional regulator of the myo-inositol catabolic operon | JCM19237_5663 | Not Available | Negative | 572557 - 573429 | 31859.7 |
| inositol transport system permease protein | JCM19237_5664 | Not Available | Negative | 573693 - 574709 | 35385.4 |
| inositol transport system atp-binding protein | JCM19237_5665 | Not Available | Negative | 574963 - 576249 | 48092.6 |
| inositol transport system sugar-binding protein | JCM19237_5666 | Not Available | Negative | 576465 - 577484 | 36829.6 |
| 5-keto-2-deoxygluconokinase / uncharacterized domain | JCM19237_5667 | Not Available | Positive | 578141 - 579313 | 42782.3 |
| 5-keto-2-deoxygluconokinase / uncharacterized domain | JCM19237_5668 | Not Available | Positive | 579268 - 580125 | 31723.9 |
| methylmalonate-semialdehyde dehydrogenase | JCM19237_5669 | Not Available | Positive | 580175 - 581686 | 54203.0 |
| sam-dependent methyltransferases | JCM19237_5670 | Not Available | Negative | 581792 - 582535 | 28480.7 |
| acyl dehydratase | JCM19237_5671 | Not Available | Negative | 582838 - 583479 | 24005.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
