Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismatase | ABT58_04100 | Not Available | Positive | 946409 - 946780 | 13813.0 |
| s-(hydroxymethyl)glutathione dehydrogenase | ABT58_04105 | Not Available | Negative | 946960 - 948108 | 40753.4 |
| hemin abc transporter atp-binding protein | ABT58_04110 | Not Available | Negative | 948470 - 949234 | 27214.8 |
| iron abc transporter permease | ABT58_04115 | Not Available | Negative | 949234 - 950289 | 36590.6 |
| hemin receptor | ABT58_04120 | Not Available | Negative | 950305 - 951144 | 29006.0 |
| biopolymer transporter exbd | ABT58_04125 | Not Available | Negative | 951228 - 951644 | 15207.3 |
| hypothetical protein | ABT58_04135 | Not Available | Negative | 952417 - 953205 | 29103.5 |
| coproporphyrinogen iii oxidase | ABT58_04140 | Not Available | Positive | 953385 - 954749 | 50494.5 |
| huvx protein | ABT58_04145 | Not Available | Positive | 954810 - 955334 | 19365.2 |
| hugz protein | ABT58_04150 | Not Available | Positive | 955331 - 955867 | 20243.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
