Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| myo-inositol 2-dehydrogenase | JCM19237_5652 | Not Available | Positive | 563945 - 564592 | 24588.3 |
| myo-inositol 2-dehydrogenase | JCM19237_5653 | Not Available | Positive | 564592 - 565119 | 19524.9 |
| 5-keto-2-deoxygluconokinase | JCM19237_5654 | Not Available | Positive | 565132 - 566127 | 35664.2 |
| 5-deoxy-glucuronate isomerase | JCM19237_5655 | Not Available | Positive | 566344 - 567213 | 32680.2 |
| 5-keto-2-deoxy-d-gluconate-6 phosphate aldolase | JCM19237_5656 | Not Available | Positive | 567225 - 568052 | 30355.2 |
| predicted transcriptional regulator of the myo-inositol catabolic operon | JCM19237_5657 | Not Available | Positive | 568222 - 569058 | 31383.0 |
| inosose isomerase | JCM19237_5658 | Not Available | Positive | 569203 - 569526 | 11905.3 |
| inosose isomerase | JCM19237_5659 | Not Available | Positive | 569724 - 570029 | 11486.5 |
| metabolite transporter (dmt) superfamily | JCM19237_5660 | Not Available | Positive | 570145 - 570642 | 18022.0 |
| metabolite transporter (dmt) superfamily | JCM19237_5661 | Not Available | Positive | 570639 - 571040 | 15047.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
