Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion protein rhs | ABT58_03665 | Not Available | Positive | 833009 - 834847 | 68104.3 |
| hypothetical protein | ABT58_03670 | Not Available | Positive | 835888 - 839160 | 124845.0 |
| hypothetical protein | ABT58_03680 | Not Available | Positive | 840058 - 840552 | 18984.9 |
| hypothetical protein | ABT58_03685 | Not Available | Positive | 841030 - 841782 | 28802.7 |
| lysr family transcriptional regulator | ABT58_03690 | Not Available | Positive | 841958 - 842842 | 33939.9 |
| hypothetical protein | ABT58_03695 | Not Available | Positive | 843091 - 843309 | 7216.47 |
| hypothetical protein | ABT58_03700 | Not Available | Positive | 843618 - 844202 | 20174.9 |
| c4-dicarboxylate abc transporter | ABT58_03705 | Not Available | Negative | 844334 - 845704 | 48298.9 |
| lysr family transcriptional regulator | ABT58_03710 | Not Available | Negative | 845899 - 846819 | 33822.5 |
| monooxygenase | ABT58_03715 | Not Available | Positive | 846943 - 847257 | 11173.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
