Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | ABT58_03545 | Not Available | Negative | 801090 - 801836 | 28127.5 |
| amino acid abc transporter permease | ABT58_03550 | Not Available | Negative | 801925 - 803022 | 40865.0 |
| amino acid abc transporter permease | ABT58_03555 | Not Available | Negative | 803126 - 804322 | 43149.7 |
| amino acid abc transporter substrate-binding protein | ABT58_03560 | Not Available | Negative | 804476 - 805525 | 37748.6 |
| hypothetical protein | ABT58_03565 | Not Available | Negative | 806043 - 806903 | 32807.7 |
| hypothetical protein | ABT58_03570 | Not Available | Negative | 807634 - 807978 | 13315.1 |
| type vi secretion protein vasd | ABT58_03585 | Not Available | Positive | 812349 - 812810 | 16900.9 |
| type vi secretion protein | ABT58_03590 | Not Available | Positive | 812842 - 814170 | 49436.9 |
| type iv secretion protein dotu | ABT58_03595 | Not Available | Positive | 814201 - 815499 | 48413.9 |
| type vi secretion protein icmf | ABT58_03600 | Not Available | Positive | 815520 - 819074 | 134071.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
