Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | ABT58_03390 | Not Available | Negative | 760803 - 762689 | 68206.3 |
| geranyl transferase | ABT58_03395 | Not Available | Negative | 762714 - 763616 | 32460.7 |
| exodeoxyribonuclease vii small subunit | ABT58_03400 | Not Available | Negative | 763609 - 763851 | 8925.44 |
| flagellar motor protein poma | ABT58_03405 | Not Available | Positive | 764190 - 764951 | 27278.0 |
| flagellar motor protein motb | ABT58_03410 | Not Available | Positive | 764960 - 765892 | 34456.9 |
| trna s(4)u8 sulfurtransferase | ABT58_03415 | Not Available | Positive | 766129 - 767577 | 54312.4 |
| Trna-cys | Not Available | Not Available | Positive | 767895 - 767968 | Not Available |
| hypothetical protein | ABT58_03425 | Not Available | Positive | 768160 - 770052 | 72853.9 |
| asparagine synthase | ABT58_03430 | Not Available | Negative | 770115 - 771122 | 38457.7 |
| hypothetical protein | ABT58_03435 | Not Available | Negative | 771340 - 773112 | 68030.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
