Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside diphosphate kinase | ABT58_03180 | Not Available | Positive | 701770 - 702198 | 15618.8 |
| ribosomal rna large subunit methyltransferase n | ABT58_03185 | Not Available | Positive | 702459 - 703580 | 42003.5 |
| pilus assembly protein pilw | ABT58_03190 | Not Available | Positive | 703650 - 704408 | 28901.1 |
| xre family transcriptional regulator | ABT58_03195 | Not Available | Positive | 704398 - 705387 | 36007.1 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | ABT58_03200 | Not Available | Positive | 705402 - 706517 | 40447.7 |
| histidinol dehydrogenase | ABT58_03205 | Not Available | Positive | 706621 - 707889 | 47237.9 |
| membrane protein | ABT58_03210 | Not Available | Positive | 707903 - 708514 | 21937.6 |
| membrane biogenesis protein | ABT58_03215 | Not Available | Positive | 708531 - 709688 | 40971.6 |
| gtp-binding protein der | ABT58_03220 | Not Available | Positive | 709869 - 711368 | 55716.8 |
| multidrug mfs transporter | ABT58_03230 | Not Available | Positive | 712611 - 714137 | 55392.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
