Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogen fixation protein nifu | ABT58_03080 | Not Available | Negative | 674817 - 675509 | 24785.7 |
| hypothetical protein | ABT58_03085 | Not Available | Positive | 676132 - 676440 | 12345.0 |
| hypothetical protein | ABT58_03090 | Not Available | Negative | 676591 - 677109 | 18739.0 |
| atp-dependent protease | ABT58_03095 | Not Available | Positive | 677692 - 680064 | 88512.8 |
| hypothetical protein | ABT58_03100 | Not Available | Positive | 680064 - 680480 | 15649.3 |
| 3-hydroxy-3-methylglutaryl-coa reductase | ABT58_03105 | Not Available | Negative | 680519 - 681778 | 44943.9 |
| oxidoreductase | ABT58_03110 | Not Available | Positive | 682173 - 683081 | 33789.3 |
| tetr family transcriptional regulator | ABT58_03115 | Not Available | Positive | 683345 - 684106 | 28211.9 |
| hypothetical protein | ABT58_03120 | Not Available | Negative | 684228 - 685679 | 55096.9 |
| endoglucanase | ABT58_03125 | Not Available | Negative | 685676 - 686713 | 39626.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
