Photobacterium aphoticum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aphoticum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aphoticum DNA, contig: contig00056, strain: JCM

Gene Summary

Adenine Count

1355547 bp

Thymine Count

1364935 bp

Guanine Count

1392623 bp

Cytosine Count

1299193 bp

Genome Length

5412298 bp

Protein-coding Genes

6938 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinABT58_03020Not AvailablePositive662930 - 6631458691.55
gnat family acetyltransferaseABT58_03025Not AvailablePositive663239 - 66382321679.9
chemotaxis proteinABT58_03040Not AvailablePositive667540 - 66917159379.4
oxidoreductaseABT58_03045Not AvailableNegative669286 - 67040141468.5
hypothetical proteinABT58_03050Not AvailablePositive670689 - 67105413663.6
hypothetical proteinABT58_03055Not AvailablePositive671266 - 67161913606.3
hypothetical proteinABT58_03060Not AvailablePositive671666 - 67204014284.8
hypothetical proteinABT58_03065Not AvailablePositive672128 - 67257716972.1
gcn5 family acetyltransferaseABT58_03070Not AvailablePositive672708 - 67355931545.7
gggtgrt proteinABT58_03075Not AvailableNegative673744 - 67474535596.1

Displaying genes 7631 – 7640 of 11511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.