Photobacterium aphoticum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aphoticum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aphoticum DNA, contig: contig00056, strain: JCM

Gene Summary

Adenine Count

1355547 bp

Thymine Count

1364935 bp

Guanine Count

1392623 bp

Cytosine Count

1299193 bp

Genome Length

5412298 bp

Protein-coding Genes

6938 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinABT58_02970Not AvailablePositive653442 - 65427229680.3
iron abc transporter atp-binding proteinABT58_02975Not AvailableNegative654394 - 65515528351.4
abc transporter permeaseABT58_02980Not AvailableNegative655158 - 65610835130.3
iron abc transporterABT58_02985Not AvailableNegative656101 - 65706034595.5
ferric anguibactin-binding proteinABT58_02990Not AvailableNegative657102 - 65803434266.2
hypothetical proteinABT58_02995Not AvailablePositive658386 - 65867610617.5
histidine kinaseABT58_03000Not AvailableNegative658808 - 66019952074.1
transcriptional regulatorABT58_03005Not AvailableNegative660254 - 66104229842.2
hypothetical proteinABT58_03010Not AvailableNegative661246 - 66199226065.4
hypothetical proteinABT58_03015Not AvailableNegative662003 - 66268623162.2

Displaying genes 7621 – 7630 of 11511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.